STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS3533Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1170 aa)    
Predicted Functional Partners:
NAV_LOCUS660
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
NAV_LOCUS6933
Uncharacterized protein.
 
 0.999
NAV_LOCUS5802
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
NAV_LOCUS6812
Uncharacterized protein.
  
 0.993
NAV_LOCUS753
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.992
NAV_LOCUS4060
Lysine--tRNA ligase.
  
 0.979
NAV_LOCUS1967
Uncharacterized protein.
  
 0.978
NAV_LOCUS3194
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.977
NAV_LOCUS1061
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.964
NAV_LOCUS1290
DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.958
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.