Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS3789Uncharacterized protein. (363 aa)    
Predicted Functional Partners:
NAV_LOCUS2506
Uncharacterized protein.
  
 0.998
NAV_LOCUS7908
Uncharacterized protein.
  
 0.995
NAV_LOCUS1685
Uncharacterized protein.
   
 
 0.982
NAV_LOCUS4146
Uncharacterized protein.
   
 
 0.978
NAV_LOCUS934
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.973
NAV_LOCUS5634
Uncharacterized protein.
   
 
 0.960
NAV_LOCUS8707
Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.
   
 
 0.956
NAV_LOCUS6863
Uncharacterized protein.
    
 0.944
NAV_LOCUS3523
Uncharacterized protein.
  
 
 0.939
NAV_LOCUS3401
2Fe-2S ferredoxin-type domain-containing protein.
    
 0.932
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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