STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS623Uncharacterized protein. (1778 aa)    
Predicted Functional Partners:
NAV_LOCUS4214
SMC hinge domain-containing protein.
   
 0.999
NAV_LOCUS4373
Structural maintenance of chromosomes protein.
   
 0.999
NAV_LOCUS4213
Uncharacterized protein.
   
 0.996
NAV_LOCUS651
Uncharacterized protein.
   
 0.993
NAV_LOCUS4536
Cnd3 domain-containing protein.
   
 0.993
NAV_LOCUS6439
Structural maintenance of chromosomes protein.
   
 0.969
NAV_LOCUS752
Structural maintenance of chromosomes protein.
   
 0.968
NAV_LOCUS5120
SMC_N domain-containing protein.
   
 0.953
NAV_LOCUS3847
DNA polymerase.
   
  
 0.940
NAV_LOCUS956
SMC_N domain-containing protein.
   
 0.925
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.