STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS5678Uncharacterized protein. (388 aa)    
Predicted Functional Partners:
NAV_LOCUS194
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 
 0.557
NAV_LOCUS3097
Ubiquitin-like domain-containing protein.
    
   0.552
NAV_LOCUS5445
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
   0.546
NAV_LOCUS6311
UBX domain-containing protein.
    
   0.544
NAV_LOCUS7550
Zf-rbx1 domain-containing protein.
    
   0.432
NAV_LOCUS1823
Ubiquitin-like domain-containing protein.
    
   0.412
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.