NAV_LOCUS2220 protein (Acanthocheilonema viteae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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[Homology]

Score

NAV_LOCUS2220

Uncharacterized protein. (232 aa)

Predicted Functional Partners:

NAV_LOCUS6382

0.992

NAV_LOCUS2962

0.942

NAV_LOCUS7795

0.942

NAV_LOCUS3623

0.758

NAV_LOCUS5996

0.697

NAV_LOCUS3461

0.616

NAV_LOCUS5491

0.573

NAV_LOCUS3339

0.572

NAV_LOCUS5758

0.572

NAV_LOCUS4177

0.571

Your Current Organism:

Acanthocheilonema viteae

NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NAV_LOCUS2220	NAV_LOCUS2962	A0A498SC20	A0A498SHM8	Uncharacterized protein.	Uncharacterized protein.	0.942
NAV_LOCUS2220	NAV_LOCUS3339	A0A498SC20	A0A498SIP3	Uncharacterized protein.	Uncharacterized protein.	0.572
NAV_LOCUS2220	NAV_LOCUS3461	A0A498SC20	A0A498SAF0	Uncharacterized protein.	Uncharacterized protein.	0.616
NAV_LOCUS2220	NAV_LOCUS3623	A0A498SC20	A0A498SFW4	Uncharacterized protein.	Uncharacterized protein.	0.758
NAV_LOCUS2220	NAV_LOCUS4177	A0A498SC20	A0A498SCP2	Uncharacterized protein.	Uncharacterized protein.	0.571
NAV_LOCUS2220	NAV_LOCUS5491	A0A498SC20	A0A498SFU5	Uncharacterized protein.	Uncharacterized protein.	0.573
NAV_LOCUS2220	NAV_LOCUS5758	A0A498SC20	A0A498SLV6	Uncharacterized protein.	Uncharacterized protein.	0.572
NAV_LOCUS2220	NAV_LOCUS5996	A0A498SC20	A0A498SHG4	Uncharacterized protein.	Aha1_N domain-containing protein.	0.697
NAV_LOCUS2220	NAV_LOCUS6382	A0A498SC20	A0A498SNR0	Uncharacterized protein.	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	0.992
NAV_LOCUS2220	NAV_LOCUS7795	A0A498SC20	A0A498SW23	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.942
NAV_LOCUS2962	NAV_LOCUS2220	A0A498SHM8	A0A498SC20	Uncharacterized protein.	Uncharacterized protein.	0.942
NAV_LOCUS2962	NAV_LOCUS3339	A0A498SHM8	A0A498SIP3	Uncharacterized protein.	Uncharacterized protein.	0.890
NAV_LOCUS2962	NAV_LOCUS3623	A0A498SHM8	A0A498SFW4	Uncharacterized protein.	Uncharacterized protein.	0.517
NAV_LOCUS2962	NAV_LOCUS4177	A0A498SHM8	A0A498SCP2	Uncharacterized protein.	Uncharacterized protein.	0.624
NAV_LOCUS2962	NAV_LOCUS5491	A0A498SHM8	A0A498SFU5	Uncharacterized protein.	Uncharacterized protein.	0.941
NAV_LOCUS2962	NAV_LOCUS5758	A0A498SHM8	A0A498SLV6	Uncharacterized protein.	Uncharacterized protein.	0.890
NAV_LOCUS3339	NAV_LOCUS2220	A0A498SIP3	A0A498SC20	Uncharacterized protein.	Uncharacterized protein.	0.572
NAV_LOCUS3339	NAV_LOCUS2962	A0A498SIP3	A0A498SHM8	Uncharacterized protein.	Uncharacterized protein.	0.890
NAV_LOCUS3339	NAV_LOCUS3623	A0A498SIP3	A0A498SFW4	Uncharacterized protein.	Uncharacterized protein.	0.703
NAV_LOCUS3339	NAV_LOCUS5758	A0A498SIP3	A0A498SLV6	Uncharacterized protein.	Uncharacterized protein.	0.860