STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS1609Uncharacterized protein. (425 aa)    
Predicted Functional Partners:
NAV_LOCUS1337
Uncharacterized protein.
    
 0.994
NAV_LOCUS3260
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.964
NAV_LOCUS1388
Protein kinase domain-containing protein.
   
 0.955
NAV_LOCUS1995
Uncharacterized protein.
   
 0.947
NAV_LOCUS3938
Peptidase S59 domain-containing protein.
   
 0.944
NAV_LOCUS4299
Nucleoporin_C domain-containing protein.
   
 0.944
NAV_LOCUS3522
RRM Nup35-type domain-containing protein.
   
 0.939
NAV_LOCUS6196
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.928
NAV_LOCUS6751
Nsp1_C domain-containing protein.
   
 
 0.925
NAV_LOCUS4620
Uncharacterized protein.
   
 
 0.923
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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