STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS1152Alba domain-containing protein. (196 aa)    
Predicted Functional Partners:
NAV_LOCUS2509
POP4 domain-containing protein.
    
 0.970
NAV_LOCUS1299
Uncharacterized protein.
   
 0.945
NAV_LOCUS2286
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.930
NAV_LOCUS1038
Uncharacterized protein.
    
 0.930
NAV_LOCUS8195
Uncharacterized protein.
   
 0.920
NAV_LOCUS524
Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.
   
 
 0.860
NAV_LOCUS1123
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 0.755
NAV_LOCUS3350
Uncharacterized protein.
    
 0.755
NAV_LOCUS3144
Ribosomal_L7Ae domain-containing protein.
    
 0.755
NAV_LOCUS6802
Ribosomal_L7Ae domain-containing protein.
    
 0.755
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.