STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS1193Uncharacterized protein. (3929 aa)    
Predicted Functional Partners:
NAV_LOCUS3915
Sema domain-containing protein.
    
 0.759
NAV_LOCUS6496
Sema domain-containing protein.
    
 0.759
NAV_LOCUS4259
Metalloendopeptidase.
   
 0.650
NAV_LOCUS5159
Metalloendopeptidase.
   
 0.650
NAV_LOCUS3499
Metalloendopeptidase.
   
 0.650
NAV_LOCUS7517
Metalloendopeptidase.
   
 0.650
NAV_LOCUS7792
ZnMc domain-containing protein.
   
 0.650
NAV_LOCUS9085
Metalloendopeptidase.
   
 0.650
NAV_LOCUS8073
CUB domain-containing protein.
   
 0.650
NAV_LOCUS9697
Astacin domain-containing protein.
   
 0.650
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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