STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS5211Uncharacterized protein. (100 aa)    
Predicted Functional Partners:
NAV_LOCUS4090
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.974
NAV_LOCUS8836
GRIP domain-containing protein.
    
 0.952
NAV_LOCUS1004
Uncharacterized protein.
    
 0.929
NAV_LOCUS2530
RIC1 domain-containing protein.
    
 0.920
NAV_LOCUS4428
CNH domain-containing protein.
    
 
 0.920
NAV_LOCUS5209
Uncharacterized protein.
 
      0.900
NAV_LOCUS1310
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.897
NAV_LOCUS1727
Vps53_N domain-containing protein.
    
 0.886
NAV_LOCUS2678
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.875
NAV_LOCUS6876
Uncharacterized protein.
    
 0.869
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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