STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS4009Uncharacterized protein. (93 aa)    
Predicted Functional Partners:
NAV_LOCUS5268
Glucosylceramidase.
    
 0.760
NAV_LOCUS4592
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.739
NAV_LOCUS4151
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.739
NAV_LOCUS6714
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.739
NAV_LOCUS3555
V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.
   
 
  0.697
NAV_LOCUS2233
Uncharacterized protein.
   
 
  0.696
NAV_LOCUS880
V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
     
 0.691
NAV_LOCUS1181
Ima1_N domain-containing protein.
     
 0.690
NAV_LOCUS879
Uncharacterized protein.
     
 0.574
NAV_LOCUS2218
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 
 0.549
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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