STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS4848Uncharacterized protein. (360 aa)    
Predicted Functional Partners:
NAV_LOCUS6518
Uncharacterized protein.
   
 0.973
NAV_LOCUS2417
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.969
NAV_LOCUS3348
Uncharacterized protein.
    
 0.969
NAV_LOCUS8685
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.946
NAV_LOCUS5304
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.914
NAV_LOCUS5305
Maelstrom domain-containing protein.
    
 0.912
NAV_LOCUS647
Uncharacterized protein.
   
 0.901
NAV_LOCUS646
Uncharacterized protein.
   
 0.901
NAV_LOCUS3489
Uncharacterized protein.
   
 0.807
NAV_LOCUS4004
Foie-gras_1 domain-containing protein.
   
 
 0.787
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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