STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
inx-13Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (556 aa)    
Predicted Functional Partners:
NAV_LOCUS6434
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
NAV_LOCUS399
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.998
NAV_LOCUS938
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.998
NAV_LOCUS3275
Ribos_L4_asso_C domain-containing protein.
   
 0.998
NAV_LOCUS3780
Uncharacterized protein.
   
 0.998
NAV_LOCUS1131
Ribosomal_S10 domain-containing protein.
   
 0.998
NAV_LOCUS3278
Uncharacterized protein.
   
 0.998
NAV_LOCUS3482
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
   
 0.998
NAV_LOCUS2888
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.998
NAV_LOCUS6215
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.998
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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