Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NAV_LOCUS1092 | NAV_LOCUS1347 | A0A498SCF4 | A0A498S4P1 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | DAO domain-containing protein. | 0.410 |
NAV_LOCUS1092 | NAV_LOCUS1654 | A0A498SCF4 | A0A498S5S7 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | Mur_ligase_M domain-containing protein. | 0.422 |
NAV_LOCUS1092 | NAV_LOCUS3767 | A0A498SCF4 | A0A498SG87 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.894 |
NAV_LOCUS1092 | NAV_LOCUS6099 | A0A498SCF4 | A0A498SGH1 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | ADSL_C domain-containing protein. | 0.999 |
NAV_LOCUS1092 | NAV_LOCUS6933 | A0A498SCF4 | A0A498SIN4 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | Uncharacterized protein. | 0.634 |
NAV_LOCUS1141 | NAV_LOCUS1347 | A0A498S6G6 | A0A498S4P1 | DHFR domain-containing protein. | DAO domain-containing protein. | 0.838 |
NAV_LOCUS1141 | NAV_LOCUS1654 | A0A498S6G6 | A0A498S5S7 | DHFR domain-containing protein. | Mur_ligase_M domain-containing protein. | 0.948 |
NAV_LOCUS1141 | NAV_LOCUS2219 | A0A498S6G6 | A0A498SE78 | DHFR domain-containing protein. | GCV_T domain-containing protein. | 0.901 |
NAV_LOCUS1141 | NAV_LOCUS3767 | A0A498S6G6 | A0A498SG87 | DHFR domain-containing protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.926 |
NAV_LOCUS1141 | NAV_LOCUS4026 | A0A498S6G6 | A0A498SBM3 | DHFR domain-containing protein. | Lipoyl-binding domain-containing protein. | 0.935 |
NAV_LOCUS1141 | NAV_LOCUS435 | A0A498S6G6 | A0A498S4L9 | DHFR domain-containing protein. | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.948 |
NAV_LOCUS1141 | NAV_LOCUS8628 | A0A498S6G6 | A0A498SPY2 | DHFR domain-containing protein. | Hcy-binding domain-containing protein. | 0.931 |
NAV_LOCUS1347 | NAV_LOCUS1092 | A0A498S4P1 | A0A498SCF4 | DAO domain-containing protein. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | 0.410 |
NAV_LOCUS1347 | NAV_LOCUS1141 | A0A498S4P1 | A0A498S6G6 | DAO domain-containing protein. | DHFR domain-containing protein. | 0.838 |
NAV_LOCUS1347 | NAV_LOCUS3767 | A0A498S4P1 | A0A498SG87 | DAO domain-containing protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.918 |
NAV_LOCUS1347 | NAV_LOCUS4026 | A0A498S4P1 | A0A498SBM3 | DAO domain-containing protein. | Lipoyl-binding domain-containing protein. | 0.895 |
NAV_LOCUS1347 | NAV_LOCUS435 | A0A498S4P1 | A0A498S4L9 | DAO domain-containing protein. | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.837 |
NAV_LOCUS1347 | NAV_LOCUS8628 | A0A498S4P1 | A0A498SPY2 | DAO domain-containing protein. | Hcy-binding domain-containing protein. | 0.899 |
NAV_LOCUS1654 | NAV_LOCUS1092 | A0A498S5S7 | A0A498SCF4 | Mur_ligase_M domain-containing protein. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | 0.422 |
NAV_LOCUS1654 | NAV_LOCUS1141 | A0A498S5S7 | A0A498S6G6 | Mur_ligase_M domain-containing protein. | DHFR domain-containing protein. | 0.948 |
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