Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NAV_LOCUS1932 | NAV_LOCUS341 | A0A498S8L0 | A0A498RXL4 | PAS domain-containing protein. | Photolyase/cryptochrome alpha/beta domain-containing protein. | 0.995 |
NAV_LOCUS1932 | NAV_LOCUS6079 | A0A498S8L0 | A0A498SGF2 | PAS domain-containing protein. | Uncharacterized protein. | 0.994 |
NAV_LOCUS341 | NAV_LOCUS1932 | A0A498RXL4 | A0A498S8L0 | Photolyase/cryptochrome alpha/beta domain-containing protein. | PAS domain-containing protein. | 0.995 |
NAV_LOCUS341 | NAV_LOCUS6079 | A0A498RXL4 | A0A498SGF2 | Photolyase/cryptochrome alpha/beta domain-containing protein. | Uncharacterized protein. | 0.970 |
NAV_LOCUS3417 | NAV_LOCUS3520 | A0A498SAB3 | A0A498SHX1 | DNA helicase; Belongs to the MCM family. | Mcl1_mid domain-containing protein. | 0.997 |
NAV_LOCUS3417 | NAV_LOCUS3820 | A0A498SAB3 | A0A498SB98 | DNA helicase; Belongs to the MCM family. | DNA helicase; Belongs to the MCM family. | 0.999 |
NAV_LOCUS3417 | NAV_LOCUS4128 | A0A498SAB3 | A0A498SB53 | DNA helicase; Belongs to the MCM family. | DNA helicase; Belongs to the MCM family. | 0.999 |
NAV_LOCUS3417 | NAV_LOCUS5513 | A0A498SAB3 | A0A498SG85 | DNA helicase; Belongs to the MCM family. | TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. | 0.974 |
NAV_LOCUS3417 | NAV_LOCUS5773 | A0A498SAB3 | A0A498SQE7 | DNA helicase; Belongs to the MCM family. | Uncharacterized protein. | 0.928 |
NAV_LOCUS3417 | NAV_LOCUS6071 | A0A498SAB3 | A0A498SMS1 | DNA helicase; Belongs to the MCM family. | DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. | 0.997 |
NAV_LOCUS3417 | NAV_LOCUS6079 | A0A498SAB3 | A0A498SGF2 | DNA helicase; Belongs to the MCM family. | Uncharacterized protein. | 0.977 |
NAV_LOCUS3417 | NAV_LOCUS6841 | A0A498SAB3 | A0A498SPZ6 | DNA helicase; Belongs to the MCM family. | DNA helicase; Belongs to the MCM family. | 0.999 |
NAV_LOCUS3520 | NAV_LOCUS3417 | A0A498SHX1 | A0A498SAB3 | Mcl1_mid domain-containing protein. | DNA helicase; Belongs to the MCM family. | 0.997 |
NAV_LOCUS3520 | NAV_LOCUS3820 | A0A498SHX1 | A0A498SB98 | Mcl1_mid domain-containing protein. | DNA helicase; Belongs to the MCM family. | 0.998 |
NAV_LOCUS3520 | NAV_LOCUS4128 | A0A498SHX1 | A0A498SB53 | Mcl1_mid domain-containing protein. | DNA helicase; Belongs to the MCM family. | 0.997 |
NAV_LOCUS3520 | NAV_LOCUS5513 | A0A498SHX1 | A0A498SG85 | Mcl1_mid domain-containing protein. | TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. | 0.992 |
NAV_LOCUS3520 | NAV_LOCUS5773 | A0A498SHX1 | A0A498SQE7 | Mcl1_mid domain-containing protein. | Uncharacterized protein. | 0.913 |
NAV_LOCUS3520 | NAV_LOCUS6071 | A0A498SHX1 | A0A498SMS1 | Mcl1_mid domain-containing protein. | DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. | 0.996 |
NAV_LOCUS3520 | NAV_LOCUS6079 | A0A498SHX1 | A0A498SGF2 | Mcl1_mid domain-containing protein. | Uncharacterized protein. | 0.990 |
NAV_LOCUS3520 | NAV_LOCUS6841 | A0A498SHX1 | A0A498SPZ6 | Mcl1_mid domain-containing protein. | DNA helicase; Belongs to the MCM family. | 0.997 |
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