STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS5588Uncharacterized protein. (172 aa)    
Predicted Functional Partners:
NAV_LOCUS8846
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
    
  0.857
NAV_LOCUS3945
DUF1768 domain-containing protein.
     
 0.827
NAV_LOCUS1860
Flavoprotein domain-containing protein.
   
 
 0.812
NAV_LOCUS4923
Uncharacterized protein.
   
 
 0.812
NAV_LOCUS344
Uncharacterized protein.
    
  0.762
NAV_LOCUS1829
Uncharacterized protein.
     
 0.731
NAV_LOCUS5547
PNP_UDP_1 domain-containing protein.
     
 0.568
NAV_LOCUS4987
PUM-HD domain-containing protein.
    
   0.543
NAV_LOCUS6806
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
  0.541
inx-6
Innexin; Structural component of the gap junctions. Belongs to the pannexin family.
  
    0.539
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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