STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS2593Uncharacterized protein. (328 aa)    
Predicted Functional Partners:
NAV_LOCUS4354
Transket_pyr domain-containing protein.
    
 
 0.944
NAV_LOCUS9859
Ubiquitin-like domain-containing protein.
    
  0.890
NAV_LOCUS5008
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.881
NAV_LOCUS3426
Uncharacterized protein.
    
 0.879
NAV_LOCUS2495
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.867
NAV_LOCUS6059
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.867
NAV_LOCUS5208
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.867
NAV_LOCUS375
Uncharacterized protein.
    
 0.864
NAV_LOCUS3147
Uncharacterized protein.
   
 0.859
NAV_LOCUS6434
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.859
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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