STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS5692Uncharacterized protein. (486 aa)    
Predicted Functional Partners:
NAV_LOCUS1903
Small ubiquitin-related modifier.
   
 0.955
NAV_LOCUS3258
Ubiquitin-like domain-containing protein.
   
 0.955
NAV_LOCUS1337
Uncharacterized protein.
   
 0.879
NAV_LOCUS6683
HMG box domain-containing protein.
    
 0.853
NAV_LOCUS1963
Uncharacterized protein.
    
 0.848
NAV_LOCUS2532
ULP_PROTEASE domain-containing protein.
    
 0.846
NAV_LOCUS3530
ULP_PROTEASE domain-containing protein.
    
 0.846
NAV_LOCUS5501
Aquaporin; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 0.846
NAV_LOCUS8435
Aquaporin; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 0.846
NAV_LOCUS3804
Uncharacterized protein.
    
 
 0.837
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.