STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS2724Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (311 aa)    
Predicted Functional Partners:
NAV_LOCUS6434
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.931
NAV_LOCUS5800
Ribosomal_L14e domain-containing protein.
   
 
 0.737
NAV_LOCUS1934
Ribosomal_L6e_N domain-containing protein.
   
 
 0.696
NAV_LOCUS5845
Ribosomal_L2_C domain-containing protein.
   
 
 0.691
NAV_LOCUS5250
Ribosomal_L28e domain-containing protein.
   
   0.668
NAV_LOCUS4906
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
   0.667
NAV_LOCUS8370
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
   0.664
NAV_LOCUS6992
Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
     
 0.663
NAV_LOCUS3821
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.655
NAV_LOCUS5740
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.651
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.