STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS6423Uncharacterized protein. (623 aa)    
Predicted Functional Partners:
NAV_LOCUS3718
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
   
 0.999
NAV_LOCUS8334
HORMA domain-containing protein.
    
 0.993
NAV_LOCUS5633
Uncharacterized protein; Belongs to the VPS28 family.
    
 0.990
NAV_LOCUS4086
Uncharacterized protein.
    
 0.989
NAV_LOCUS2427
Uncharacterized protein.
    
 0.981
NAV_LOCUS9859
Ubiquitin-like domain-containing protein.
    
 0.976
NAV_LOCUS5113
Ubiquitin-like domain-containing protein.
    
 0.973
NAV_LOCUS3147
Uncharacterized protein.
    
  0.972
NAV_LOCUS1738
Uncharacterized protein.
    
 0.964
NAV_LOCUS7476
Uncharacterized protein.
    
 0.962
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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