STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS7783Uncharacterized protein. (363 aa)    
Predicted Functional Partners:
NAV_LOCUS4064
PHD-type domain-containing protein.
     
 0.941
NAV_LOCUS7304
Uncharacterized protein.
   
 0.831
NAV_LOCUS7306
RRM domain-containing protein.
   
 0.831
NAV_LOCUS1138
Uncharacterized protein.
   
 0.805
NAV_LOCUS5893
Uncharacterized protein.
   
 0.805
NAV_LOCUS1832
Uncharacterized protein.
    
  0.798
NAV_LOCUS6763
Uncharacterized protein.
   
 0.793
NAV_LOCUS2840
TAFH domain-containing protein.
   
  0.790
NAV_LOCUS2383
Uncharacterized protein.
   
 0.789
NAV_LOCUS6858
Uncharacterized protein.
   
 0.752
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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