STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS6584UBX domain-containing protein. (553 aa)    
Predicted Functional Partners:
NAV_LOCUS3273
Uncharacterized protein.
   
 0.992
NAV_LOCUS5778
UBX domain-containing protein.
    
 0.982
NAV_LOCUS6311
UBX domain-containing protein.
    
 
 0.979
NAV_LOCUS9123
Uncharacterized protein.
    
 
 0.977
NAV_LOCUS5154
Uncharacterized protein.
    
 0.968
NAV_LOCUS6350
TUG-UBL1 domain-containing protein.
    
 0.968
NAV_LOCUS5770
Uncharacterized protein.
   
 0.964
NAV_LOCUS6819
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.964
NAV_LOCUS3974
Uncharacterized protein.
   
 
 0.958
NAV_LOCUS4160
Uncharacterized protein.
    
   0.940
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.