STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS4789Uncharacterized protein. (538 aa)    
Predicted Functional Partners:
NAV_LOCUS6694
Uncharacterized protein.
   
 0.828
NAV_LOCUS8253
Fe2OG dioxygenase domain-containing protein.
   
 0.828
NAV_LOCUS8252
Uncharacterized protein.
   
 0.828
NAV_LOCUS6980
Fe2OG dioxygenase domain-containing protein.
   
 0.827
NAV_LOCUS9552
Uncharacterized protein.
    
  0.595
NAV_LOCUS9249
Endostatin domain-containing protein.
    
  0.595
NAV_LOCUS9746
Uncharacterized protein.
    
  0.595
NAV_LOCUS10263
Uncharacterized protein.
    
  0.595
NAV_LOCUS9512
Uncharacterized protein.
    
  0.565
NAV_LOCUS2945
Uncharacterized protein.
   
 
  0.551
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.