STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS4873S4 RNA-binding domain-containing protein. (204 aa)    
Predicted Functional Partners:
NAV_LOCUS6688
RF_PROK_I domain-containing protein.
    
 
 0.837
NAV_LOCUS1172
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.785
NAV_LOCUS3743
Uncharacterized protein.
   
   0.782
NAV_LOCUS1689
Uncharacterized protein.
   
   0.765
NAV_LOCUS4853
RIBOSOMAL_L9 domain-containing protein.
   
   0.762
NAV_LOCUS2490
Uncharacterized protein.
   
   0.752
NAV_LOCUS6301
RF_PROK_I domain-containing protein.
    
 
 0.747
NAV_LOCUS4740
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
    
   0.741
NAV_LOCUS2963
SRR1 domain-containing protein.
   
   0.711
NAV_LOCUS3618
Uncharacterized protein.
   
   0.702
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.