STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS5018Uncharacterized protein. (877 aa)    
Predicted Functional Partners:
NAV_LOCUS712
Uncharacterized protein.
    
 0.990
NAV_LOCUS8097
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.990
NAV_LOCUS1993
Uncharacterized protein.
    
 0.986
NAV_LOCUS2873
Uncharacterized protein.
   
 0.953
NAV_LOCUS4217
GRASP55_65 domain-containing protein.
   
 0.953
NAV_LOCUS2824
Uncharacterized protein.
    
 0.945
NAV_LOCUS2279
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.926
NAV_LOCUS3529
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.925
NAV_LOCUS809
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.924
NAV_LOCUS3224
SEC7 domain-containing protein.
   
 0.861
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.