STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS6135Uncharacterized protein. (818 aa)    
Predicted Functional Partners:
NAV_LOCUS2676
CPSF_A domain-containing protein.
   
 0.957
NAV_LOCUS6422
Fip1 domain-containing protein.
    
 0.957
NAV_LOCUS2214
Uncharacterized protein.
   
 0.956
NAV_LOCUS160
Uncharacterized protein.
   
 0.955
NAV_LOCUS2527
Uncharacterized protein.
    
 0.955
NAV_LOCUS1327
Suf domain-containing protein.
    
 0.954
NAV_LOCUS5319
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.954
NAV_LOCUS1833
WD_REPEATS_REGION domain-containing protein.
   
 0.953
NAV_LOCUS4689
WD_REPEATS_REGION domain-containing protein.
   
 0.947
NAV_LOCUS3333
Homeobox domain-containing protein.
    
   0.940
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.