Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NAV_LOCUS1247 | NAV_LOCUS2482 | A0A498S3L8 | A0A498SCD6 | RRM domain-containing protein. | Uncharacterized protein. | 0.470 |
NAV_LOCUS1247 | NAV_LOCUS3921 | A0A498S3L8 | A0A498SBC2 | RRM domain-containing protein. | Protein kinase domain-containing protein. | 0.496 |
NAV_LOCUS1247 | NAV_LOCUS5379 | A0A498S3L8 | A0A498SFG4 | RRM domain-containing protein. | RRM domain-containing protein. | 0.978 |
NAV_LOCUS1247 | NAV_LOCUS6016 | A0A498S3L8 | A0A498SR16 | RRM domain-containing protein. | Uncharacterized protein. | 0.786 |
NAV_LOCUS1247 | NAV_LOCUS6369 | A0A498S3L8 | A0A498SKK4 | RRM domain-containing protein. | RRM domain-containing protein. | 0.897 |
NAV_LOCUS1247 | NAV_LOCUS6370 | A0A498S3L8 | A0A498SRZ3 | RRM domain-containing protein. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.831 |
NAV_LOCUS1247 | NAV_LOCUS7364 | A0A498S3L8 | A0A498SR92 | RRM domain-containing protein. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | 0.866 |
NAV_LOCUS1247 | NAV_LOCUS774 | A0A498S3L8 | A0A498S9S3 | RRM domain-containing protein. | RRM domain-containing protein. | 0.554 |
NAV_LOCUS1247 | NAV_LOCUS8052 | A0A498S3L8 | A0A498SNC1 | RRM domain-containing protein. | RRM domain-containing protein. | 0.981 |
NAV_LOCUS1247 | NAV_LOCUS8053 | A0A498S3L8 | A0A498STA6 | RRM domain-containing protein. | RRM domain-containing protein. | 0.970 |
NAV_LOCUS2482 | NAV_LOCUS1247 | A0A498SCD6 | A0A498S3L8 | Uncharacterized protein. | RRM domain-containing protein. | 0.470 |
NAV_LOCUS2482 | NAV_LOCUS5379 | A0A498SCD6 | A0A498SFG4 | Uncharacterized protein. | RRM domain-containing protein. | 0.883 |
NAV_LOCUS2482 | NAV_LOCUS6016 | A0A498SCD6 | A0A498SR16 | Uncharacterized protein. | Uncharacterized protein. | 0.902 |
NAV_LOCUS2482 | NAV_LOCUS6369 | A0A498SCD6 | A0A498SKK4 | Uncharacterized protein. | RRM domain-containing protein. | 0.859 |
NAV_LOCUS2482 | NAV_LOCUS8052 | A0A498SCD6 | A0A498SNC1 | Uncharacterized protein. | RRM domain-containing protein. | 0.786 |
NAV_LOCUS2482 | NAV_LOCUS8053 | A0A498SCD6 | A0A498STA6 | Uncharacterized protein. | RRM domain-containing protein. | 0.786 |
NAV_LOCUS3921 | NAV_LOCUS1247 | A0A498SBC2 | A0A498S3L8 | Protein kinase domain-containing protein. | RRM domain-containing protein. | 0.496 |
NAV_LOCUS3921 | NAV_LOCUS5379 | A0A498SBC2 | A0A498SFG4 | Protein kinase domain-containing protein. | RRM domain-containing protein. | 0.938 |
NAV_LOCUS3921 | NAV_LOCUS6016 | A0A498SBC2 | A0A498SR16 | Protein kinase domain-containing protein. | Uncharacterized protein. | 0.902 |
NAV_LOCUS3921 | NAV_LOCUS6369 | A0A498SBC2 | A0A498SKK4 | Protein kinase domain-containing protein. | RRM domain-containing protein. | 0.859 |
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