STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS4504Protein-lysine N-methyltransferase NAV_LOCUS4504; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family. (249 aa)    
Predicted Functional Partners:
NAV_LOCUS6656
GTP_EFTU_D3 domain-containing protein.
    
 0.772
NAV_LOCUS6491
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 0.772
NAV_LOCUS7957
Uncharacterized protein.
   
  
 0.689
NAV_LOCUS4476
Uncharacterized protein.
   
  
 0.678
NAV_LOCUS3241
MTS domain-containing protein.
      
 0.591
NAV_LOCUS5774
Tr-type G domain-containing protein.
      
 0.574
NAV_LOCUS201
Uncharacterized protein.
   
  
 0.560
NAV_LOCUS4069
BcrAD_BadFG domain-containing protein.
   
  
 0.558
NAV_LOCUS125
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.547
NAV_LOCUS2106
RRM domain-containing protein.
   
  
 0.546
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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