NAV_LOCUS5334 protein (Acanthocheilonema viteae)

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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Score

NAV_LOCUS5334

Uncharacterized protein. (406 aa)

Predicted Functional Partners:

NAV_LOCUS6434

0.936

NAV_LOCUS6912

0.923

NAV_LOCUS5379

0.912

NAV_LOCUS1746

0.883

NAV_LOCUS3333

0.875

NAV_LOCUS8052

0.873

NAV_LOCUS7364

0.868

NAV_LOCUS7673

0.866

NAV_LOCUS6858

0.865

NAV_LOCUS6857

0.865

Your Current Organism:

Acanthocheilonema viteae

NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NAV_LOCUS1746	NAV_LOCUS5334	A0A498S5L0	A0A498SKV5	Uncharacterized protein.	Uncharacterized protein.	0.883
NAV_LOCUS1746	NAV_LOCUS5379	A0A498S5L0	A0A498SFG4	Uncharacterized protein.	RRM domain-containing protein.	0.720
NAV_LOCUS1746	NAV_LOCUS6857	A0A498S5L0	A0A498SJQ1	Uncharacterized protein.	Uncharacterized protein.	0.796
NAV_LOCUS1746	NAV_LOCUS6858	A0A498S5L0	A0A498SER7	Uncharacterized protein.	Uncharacterized protein.	0.796
NAV_LOCUS1746	NAV_LOCUS7364	A0A498S5L0	A0A498SR92	Uncharacterized protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	0.989
NAV_LOCUS1746	NAV_LOCUS7673	A0A498S5L0	A0A498SP71	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.997
NAV_LOCUS1746	NAV_LOCUS8052	A0A498S5L0	A0A498SNC1	Uncharacterized protein.	RRM domain-containing protein.	0.482
NAV_LOCUS3333	NAV_LOCUS5334	A0A498SHC9	A0A498SKV5	Homeobox domain-containing protein.	Uncharacterized protein.	0.875
NAV_LOCUS5334	NAV_LOCUS1746	A0A498SKV5	A0A498S5L0	Uncharacterized protein.	Uncharacterized protein.	0.883
NAV_LOCUS5334	NAV_LOCUS3333	A0A498SKV5	A0A498SHC9	Uncharacterized protein.	Homeobox domain-containing protein.	0.875
NAV_LOCUS5334	NAV_LOCUS5379	A0A498SKV5	A0A498SFG4	Uncharacterized protein.	RRM domain-containing protein.	0.912
NAV_LOCUS5334	NAV_LOCUS6434	A0A498SKV5	A0A498SHB7	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.936
NAV_LOCUS5334	NAV_LOCUS6857	A0A498SKV5	A0A498SJQ1	Uncharacterized protein.	Uncharacterized protein.	0.865
NAV_LOCUS5334	NAV_LOCUS6858	A0A498SKV5	A0A498SER7	Uncharacterized protein.	Uncharacterized protein.	0.865
NAV_LOCUS5334	NAV_LOCUS6912	A0A498SKV5	A0A498SQ64	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.923
NAV_LOCUS5334	NAV_LOCUS7364	A0A498SKV5	A0A498SR92	Uncharacterized protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	0.868
NAV_LOCUS5334	NAV_LOCUS7673	A0A498SKV5	A0A498SP71	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.866
NAV_LOCUS5334	NAV_LOCUS8052	A0A498SKV5	A0A498SNC1	Uncharacterized protein.	RRM domain-containing protein.	0.873
NAV_LOCUS5379	NAV_LOCUS1746	A0A498SFG4	A0A498S5L0	RRM domain-containing protein.	Uncharacterized protein.	0.720
NAV_LOCUS5379	NAV_LOCUS5334	A0A498SFG4	A0A498SKV5	RRM domain-containing protein.	Uncharacterized protein.	0.912