NAV_LOCUS4218 protein (Acanthocheilonema viteae)

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Predicted Interactions

gene neighborhood

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Score

NAV_LOCUS4218

Uncharacterized protein. (542 aa)

Predicted Functional Partners:

NAV_LOCUS3720

0.998

NAV_LOCUS5526

0.953

NAV_LOCUS6009

0.936

NAV_LOCUS4759

0.932

NAV_LOCUS3908

0.920

LSM8

0.906

NAV_LOCUS2157

0.901

NAV_LOCUS881

0.892

NAV_LOCUS8024

0.882

NAV_LOCUS4543

0.880

Your Current Organism:

Acanthocheilonema viteae

NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM8	NAV_LOCUS2157	A0A498SPZ8	A0A498S5Z7	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.787
LSM8	NAV_LOCUS3720	A0A498SPZ8	A0A498S674	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.634
LSM8	NAV_LOCUS3908	A0A498SPZ8	A0A498SAN3	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	MPN domain-containing protein.	0.995
LSM8	NAV_LOCUS4218	A0A498SPZ8	A0A498SL32	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.906
LSM8	NAV_LOCUS4543	A0A498SPZ8	A0A498SIH2	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.985
LSM8	NAV_LOCUS4759	A0A498SPZ8	A0A498SJ26	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.995
LSM8	NAV_LOCUS5526	A0A498SPZ8	A0A498SPT5	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Matrin-type domain-containing protein.	0.960
LSM8	NAV_LOCUS6009	A0A498SPZ8	A0A498SPQ1	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.788
LSM8	NAV_LOCUS8024	A0A498SPZ8	A0A498SSY8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm domain-containing protein.	0.999
LSM8	NAV_LOCUS881	A0A498SPZ8	A0A498S3U0	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Ubiquitin-like domain-containing protein.	0.885
NAV_LOCUS2157	LSM8	A0A498S5Z7	A0A498SPZ8	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.787
NAV_LOCUS2157	NAV_LOCUS3720	A0A498S5Z7	A0A498S674	Uncharacterized protein.	Uncharacterized protein.	0.884
NAV_LOCUS2157	NAV_LOCUS3908	A0A498S5Z7	A0A498SAN3	Uncharacterized protein.	MPN domain-containing protein.	0.634
NAV_LOCUS2157	NAV_LOCUS4218	A0A498S5Z7	A0A498SL32	Uncharacterized protein.	Uncharacterized protein.	0.901
NAV_LOCUS2157	NAV_LOCUS4543	A0A498S5Z7	A0A498SIH2	Uncharacterized protein.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.880
NAV_LOCUS2157	NAV_LOCUS4759	A0A498S5Z7	A0A498SJ26	Uncharacterized protein.	Uncharacterized protein.	0.929
NAV_LOCUS2157	NAV_LOCUS5526	A0A498S5Z7	A0A498SPT5	Uncharacterized protein.	Matrin-type domain-containing protein.	0.929
NAV_LOCUS2157	NAV_LOCUS6009	A0A498S5Z7	A0A498SPQ1	Uncharacterized protein.	Uncharacterized protein.	0.917
NAV_LOCUS2157	NAV_LOCUS8024	A0A498S5Z7	A0A498SSY8	Uncharacterized protein.	Sm domain-containing protein.	0.916
NAV_LOCUS2157	NAV_LOCUS881	A0A498S5Z7	A0A498S3U0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.881