STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS6603Uncharacterized protein. (1052 aa)    
Predicted Functional Partners:
NAV_LOCUS528
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 
 0.965
NAV_LOCUS4667
Uncharacterized protein.
    
 
 0.791
NAV_LOCUS7403
Uncharacterized protein.
    
 
 0.745
NAV_LOCUS2872
Uncharacterized protein.
      
 0.615
NAV_LOCUS2257
Uncharacterized protein.
      
 0.605
NAV_LOCUS3519
Uncharacterized protein.
    
   0.553
NAV_LOCUS5283
EF1_GNE domain-containing protein.
    
   0.476
NAV_LOCUS3256
Uncharacterized protein.
    
 
 0.469
NAV_LOCUS3169
BZIP domain-containing protein.
    
   0.459
NAV_LOCUS3339
Uncharacterized protein.
    
 
 0.458
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.