STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS7940Uncharacterized protein; Belongs to the peptidase C19 family. (1165 aa)    
Predicted Functional Partners:
NAV_LOCUS3147
Uncharacterized protein.
    
 0.846
NAV_LOCUS6434
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.803
NAV_LOCUS1409
Uncharacterized protein.
   
 0.785
NAV_LOCUS7164
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.785
NAV_LOCUS9859
Ubiquitin-like domain-containing protein.
    
  0.777
NAV_LOCUS5113
Ubiquitin-like domain-containing protein.
    
 0.776
NAV_LOCUS1823
Ubiquitin-like domain-containing protein.
   
 0.773
NAV_LOCUS4073
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.773
NAV_LOCUS4736
Ubiquitin-like domain-containing protein.
    
 0.771
NAV_LOCUS7619
Uncharacterized protein.
   
 
 0.761
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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