STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS7894Uncharacterized protein. (228 aa)    
Predicted Functional Partners:
NAV_LOCUS3628
Ku domain-containing protein.
   
 0.999
NAV_LOCUS1722
WD_REPEATS_REGION domain-containing protein; Belongs to the MRE11/RAD32 family.
   
 0.989
NAV_LOCUS2631
Uncharacterized protein.
    
 0.982
NAV_LOCUS4206
DRMBL domain-containing protein.
    
 0.981
NAV_LOCUS354
DNA ligase.
   
 0.977
NAV_LOCUS4413
Uncharacterized protein; Belongs to the ATP-dependent DNA ligase family.
   
 0.972
NAV_LOCUS244
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
   
 
 0.961
NAV_LOCUS5995
Poly [ADP-ribose] polymerase.
   
 
 0.950
NAV_LOCUS2080
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.948
NAV_LOCUS2514
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 
 0.943
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.