STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS5243Uncharacterized protein. (212 aa)    
Predicted Functional Partners:
NAV_LOCUS1024
LID domain-containing protein.
    
 0.839
NAV_LOCUS2260
BHLH domain-containing protein.
    
 0.745
NAV_LOCUS794
MADS-box domain-containing protein.
    
 0.723
NAV_LOCUS8464
GATA-type domain-containing protein.
    
 0.650
NAV_LOCUS1599
Paired domain-containing protein.
    
 
 0.638
NAV_LOCUS2719
Uncharacterized protein.
  
0.636
NAV_LOCUS2767
Homeobox protein engrailed-like.
   
 0.630
NAV_LOCUS7261
BHLH domain-containing protein.
    
 0.628
NAV_LOCUS1375
Uncharacterized protein.
    
 0.625
NAV_LOCUS131
GATA-type domain-containing protein.
    
 0.609
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.