STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS8037Uncharacterized protein. (549 aa)    
Predicted Functional Partners:
NAV_LOCUS8781
Uncharacterized protein.
 
 
   0.921
NAV_LOCUS1842
Uncharacterized protein.
 
 
   0.916
NAV_LOCUS6371
Protein-tyrosine-phosphatase.
 
      0.900
NAV_LOCUS6902
Uncharacterized protein.
 
      0.900
NAV_LOCUS5088
Uncharacterized protein.
 
 
  0.884
NAV_LOCUS5853
Tyrosine-protein phosphatase domain-containing protein.
 
  
   0.873
NAV_LOCUS49
Uncharacterized protein.
 
 
   0.871
NAV_LOCUS8321
Uncharacterized protein.
 
 
   0.868
NAV_LOCUS7661
Uncharacterized protein.
 
 
 0.867
NAV_LOCUS1627
Uncharacterized protein.
 
 
   0.846
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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