STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS8618Uncharacterized protein. (434 aa)    
Predicted Functional Partners:
NAV_LOCUS964
NUC173 domain-containing protein.
   
 
 0.993
NAV_LOCUS3111
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.993
NAV_LOCUS765
CBF domain-containing protein.
   
 
 0.992
NAV_LOCUS2250
OBG-type G domain-containing protein.
   
 
 0.991
NAV_LOCUS1288
PUM-HD domain-containing protein.
   
 
 0.990
NAV_LOCUS4858
RRM domain-containing protein.
   
 
 0.988
NAV_LOCUS778
Sde2_N_Ubi domain-containing protein.
   
 
 0.987
NAV_LOCUS7654
Uncharacterized protein.
   
 
 0.986
NAV_LOCUS16
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.985
NAV_LOCUS1767
Uncharacterized protein.
   
 
 0.985
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.