STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS6504Uncharacterized protein. (306 aa)    
Predicted Functional Partners:
NAV_LOCUS2203
Uncharacterized protein.
   
  
 0.783
NAV_LOCUS1693
Uncharacterized protein.
   
  
 0.783
NAV_LOCUS2148
Uncharacterized protein.
    
 
 0.755
NAV_LOCUS3625
Uncharacterized protein.
   
0.644
NAV_LOCUS7722
Uncharacterized protein.
   
 0.644
NAV_LOCUS7970
Uncharacterized protein.
   
 0.644
NAV_LOCUS1229
Uncharacterized protein.
    
 
 0.566
NAV_LOCUS7101
Hist_deacetyl domain-containing protein.
    
   0.434
NAV_LOCUS7763
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.430
NAV_LOCUS6287
Autophagy-related protein 3.
   
  
 0.427
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.