STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS6040Uncharacterized protein. (1906 aa)    
Predicted Functional Partners:
NAV_LOCUS9859
Ubiquitin-like domain-containing protein.
   
  0.971
NAV_LOCUS4736
Ubiquitin-like domain-containing protein.
   
 0.955
NAV_LOCUS5113
Ubiquitin-like domain-containing protein.
   
 0.955
NAV_LOCUS4331
Myb-like domain-containing protein.
   
 0.907
NAV_LOCUS2800
Nucleolar protein 6.
   
 0.899
NAV_LOCUS1183
Sas10 domain-containing protein.
   
 0.898
NAV_LOCUS5135
WD_REPEATS_REGION domain-containing protein.
   
 0.897
NAV_LOCUS6259
Uncharacterized protein.
  
 0.895
NAV_LOCUS5724
Uncharacterized protein.
  
0.892
NAV_LOCUS9030
Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.890
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.