NAV_LOCUS8690 protein (Acanthocheilonema viteae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

NAV_LOCUS8690

Uncharacterized protein. (150 aa)

Predicted Functional Partners:

NAV_LOCUS5176

0.876

NAV_LOCUS5098

0.543

NAV_LOCUS7439

0.529

NAV_LOCUS6618

0.529

NAV_LOCUS8844

0.420

Your Current Organism:

Acanthocheilonema viteae

NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NAV_LOCUS5098	NAV_LOCUS8690	A0A498SK93	A0A498SQ37	Uncharacterized protein.	Uncharacterized protein.	0.543
NAV_LOCUS5176	NAV_LOCUS8690	A0A498SNK8	A0A498SQ37	Protein-serine/threonine kinase.	Uncharacterized protein.	0.876
NAV_LOCUS6618	NAV_LOCUS7439	A0A498SRL8	A0A498SGH0	Uncharacterized protein.	Uncharacterized protein.	0.951
NAV_LOCUS6618	NAV_LOCUS8690	A0A498SRL8	A0A498SQ37	Uncharacterized protein.	Uncharacterized protein.	0.529
NAV_LOCUS7439	NAV_LOCUS6618	A0A498SGH0	A0A498SRL8	Uncharacterized protein.	Uncharacterized protein.	0.951
NAV_LOCUS7439	NAV_LOCUS8690	A0A498SGH0	A0A498SQ37	Uncharacterized protein.	Uncharacterized protein.	0.529
NAV_LOCUS8690	NAV_LOCUS5098	A0A498SQ37	A0A498SK93	Uncharacterized protein.	Uncharacterized protein.	0.543
NAV_LOCUS8690	NAV_LOCUS5176	A0A498SQ37	A0A498SNK8	Uncharacterized protein.	Protein-serine/threonine kinase.	0.876
NAV_LOCUS8690	NAV_LOCUS6618	A0A498SQ37	A0A498SRL8	Uncharacterized protein.	Uncharacterized protein.	0.529
NAV_LOCUS8690	NAV_LOCUS7439	A0A498SQ37	A0A498SGH0	Uncharacterized protein.	Uncharacterized protein.	0.529
NAV_LOCUS8690	NAV_LOCUS8844	A0A498SQ37	A0A498SYT4	Uncharacterized protein.	Uncharacterized protein.	0.420
NAV_LOCUS8844	NAV_LOCUS8690	A0A498SYT4	A0A498SQ37	Uncharacterized protein.	Uncharacterized protein.	0.420