STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS9273Uncharacterized protein. (413 aa)    
Predicted Functional Partners:
NAV_LOCUS8306
Integrase catalytic domain-containing protein.
  
     0.519
NAV_LOCUS10277
Integrase_H2C2 domain-containing protein.
 
     0.519
NAV_LOCUS4454
Integrase_H2C2 domain-containing protein.
  
     0.515
NAV_LOCUS10090
Integrase catalytic domain-containing protein.
 
     0.514
NAV_LOCUS9607
Uncharacterized protein.
 
     0.514
NAV_LOCUS10376
Uncharacterized protein.
  
     0.513
NAV_LOCUS10011
Integrase catalytic domain-containing protein.
 
     0.512
NAV_LOCUS10284
Integrase_H2C2 domain-containing protein.
  
     0.511
NAV_LOCUS10114
DUF5641 domain-containing protein.
 
     0.510
NAV_LOCUS9796
Integrase catalytic domain-containing protein.
  
     0.509
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.