STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS8415Not3 domain-containing protein. (357 aa)    
Predicted Functional Partners:
NAV_LOCUS4476
Uncharacterized protein.
     
 0.828
NAV_LOCUS8270
Uncharacterized protein.
    
 0.805
NAV_LOCUS1349
Uncharacterized protein.
   
 
 0.801
NAV_LOCUS7490
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
     
 0.798
NAV_LOCUS5698
DC_STAMP domain-containing protein.
     
 0.794
NAV_LOCUS6221
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.793
NAV_LOCUS7366
Uncharacterized protein.
   
 
 0.792
NAV_LOCUS2487
Uncharacterized protein.
    
 0.779
NAV_LOCUS6378
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 
 0.779
NAV_LOCUS4701
RING-type domain-containing protein; Belongs to the cytochrome P450 family.
   
 0.767
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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