Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NAV_LOCUS1012 | NAV_LOCUS2125 | A0A498SAM0 | A0A498S6Q4 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Uncharacterized protein. | 0.999 |
NAV_LOCUS1012 | NAV_LOCUS2728 | A0A498SAM0 | A0A498SFL4 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.935 |
NAV_LOCUS1012 | NAV_LOCUS3418 | A0A498SAM0 | A0A498S5D4 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | 0.442 |
NAV_LOCUS1012 | NAV_LOCUS4006 | A0A498SAM0 | A0A498SBK3 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | VWFA domain-containing protein. | 0.999 |
NAV_LOCUS1012 | NAV_LOCUS7043 | A0A498SAM0 | A0A498SQR4 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Histone H2A; Belongs to the histone H2A family. | 0.553 |
NAV_LOCUS1012 | NAV_LOCUS8485 | A0A498SAM0 | A0A498SWH7 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Uncharacterized protein. | 0.819 |
NAV_LOCUS1012 | NAV_LOCUS997 | A0A498SAM0 | A0A498SC77 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Uncharacterized protein. | 0.999 |
NAV_LOCUS2125 | NAV_LOCUS1012 | A0A498S6Q4 | A0A498SAM0 | Uncharacterized protein. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.999 |
NAV_LOCUS2125 | NAV_LOCUS2728 | A0A498S6Q4 | A0A498SFL4 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.937 |
NAV_LOCUS2125 | NAV_LOCUS3418 | A0A498S6Q4 | A0A498S5D4 | Uncharacterized protein. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | 0.491 |
NAV_LOCUS2125 | NAV_LOCUS4006 | A0A498S6Q4 | A0A498SBK3 | Uncharacterized protein. | VWFA domain-containing protein. | 0.999 |
NAV_LOCUS2125 | NAV_LOCUS7043 | A0A498S6Q4 | A0A498SQR4 | Uncharacterized protein. | Histone H2A; Belongs to the histone H2A family. | 0.553 |
NAV_LOCUS2125 | NAV_LOCUS8485 | A0A498S6Q4 | A0A498SWH7 | Uncharacterized protein. | Uncharacterized protein. | 0.829 |
NAV_LOCUS2125 | NAV_LOCUS997 | A0A498S6Q4 | A0A498SC77 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
NAV_LOCUS2728 | NAV_LOCUS1012 | A0A498SFL4 | A0A498SAM0 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.935 |
NAV_LOCUS2728 | NAV_LOCUS2125 | A0A498SFL4 | A0A498S6Q4 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.937 |
NAV_LOCUS2728 | NAV_LOCUS3347 | A0A498SFL4 | A0A498S573 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA helicase; Belongs to the RuvB family. | 0.403 |
NAV_LOCUS2728 | NAV_LOCUS339 | A0A498SFL4 | A0A498S226 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.685 |
NAV_LOCUS2728 | NAV_LOCUS3418 | A0A498SFL4 | A0A498S5D4 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | 0.927 |
NAV_LOCUS2728 | NAV_LOCUS4006 | A0A498SFL4 | A0A498SBK3 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | VWFA domain-containing protein. | 0.946 |
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