STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bma-tbc-20BMA-TBC-20. (406 aa)    
Predicted Functional Partners:
bma-rab-1
BMA-RAB-1.
    
 0.978
Bm3207
Bm3207, isoform c.
    
 0.826
Bm1_37555
Uncharacterized protein.
   
 
 0.582
Bma-unc-108
BMA-UNC-108.
     
 0.581
Bm1_25010
Probable cytosolic Fe-S cluster assembly factor Bm1_25010; Component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for maturation of extramitochondrial Fe/S proteins (By similarity).
   
  
 0.570
Bm1_06430
BMA-TBC-11.
      
 0.551
Bma-rab-18
BMA-RAB-18, isoform d.
      
 0.537
bma-rbg-2
BMA-RBG-2.
      
 0.531
Bm1_40075
BMA-TBC-1.
      
 0.525
Bm1_31530
Uncharacterized protein.
      
 0.523
Your Current Organism:
Brugia malayi
NCBI taxonomy Id: 6279
Other names: B. malayi, agent of lymphatic filariasis
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.