STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bm1_41325Bm13985. (378 aa)    
Predicted Functional Partners:
Bm1_27550
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.990
bma-eif-6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
   
 
 0.980
Bm1_12685
Bm6238.
   
 
 0.975
A0A5S6PFU2
60S ribosomal protein L29.
    
 
 0.944
bma-rpl-24.1
BMA-RPL-24.1.
    
 
 0.935
bma-rpl-7
BMA-RPL-7.
   
 
 0.921
Bm1_04800
Bm4425, isoform b; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.916
Bm1_13895
BMA-RPL-3, isoform c; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.915
bma-rpl-24.2
Bm13894.
   
 
 0.910
bma-rpl-17
BMA-RPL-17; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.907
Your Current Organism:
Brugia malayi
NCBI taxonomy Id: 6279
Other names: B. malayi, agent of lymphatic filariasis
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