STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bm1_27160BMA-NSF-1, isoform a; BMA-NSF-1, isoform c. (750 aa)    
Predicted Functional Partners:
Bm1_13630
Bm9112.
   
 0.997
Bm1_52745
BMA-SNAP-1, isoform c; BMA-SNAP-1, isoform f.
   
 0.969
bma-sly-1
Bm13830; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.898
Bm1_52430
Bm6927.
   
 0.871
Bma-syx-6
BMA-SYX-6, isoform d; BMA-SYX-6, isoform e; Belongs to the syntaxin family.
    
 0.867
bma-unc-64.2
Bm4453, isoform a; Bm4453, isoform b; Belongs to the syntaxin family.
   
 0.864
bma-sec-22
BMA-SEC-22; Belongs to the synaptobrevin family.
    
 0.852
bma-syx-17
BMA-SYX-17.
   
 0.841
bma-syx-5
BMA-SYX-5, isoform b; BMA-SYX-5, isoform c; Belongs to the syntaxin family.
    
 0.840
bma-ykt-6
BMA-YKT-6, isoform b; BMA-YKT-6, isoform c; Belongs to the synaptobrevin family.
   
 0.837
Your Current Organism:
Brugia malayi
NCBI taxonomy Id: 6279
Other names: B. malayi, agent of lymphatic filariasis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.