STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bm1_12685Bm6238. (440 aa)    
Predicted Functional Partners:
bma-rpl-5
BMA-RPL-5.
  
 
 0.998
bma-rpl-7
BMA-RPL-7.
  
 
 0.997
Bm1_04800
Bm4425, isoform b; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.997
Bm1_27550
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.997
A0A0K0JJN9
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.996
Bm1_04440
Bm13718; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.994
Bm1_13895
BMA-RPL-3, isoform c; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.993
Bma-rpl-2
BMA-RPL-2, isoform e.
  
 
 0.993
bma-rpl-26
BMA-RPL-26.
  
 
 0.992
bma-rla-0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 
 0.991
Your Current Organism:
Brugia malayi
NCBI taxonomy Id: 6279
Other names: B. malayi, agent of lymphatic filariasis
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