Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A5S6PNC2 | Bm1_41885 | A0A5S6PNC2 | A0A0K0JPP4 | Uncharacterized protein. | Bm6802. | 0.610 |
A0A5S6PTH5 | Bm1_41885 | A0A5S6PTH5 | A0A0K0JPP4 | Uncharacterized protein. | Bm6802. | 0.544 |
A0A5S6PTH5 | Bm1_54210 | A0A5S6PTH5 | A0A5S6PA72 | Uncharacterized protein. | Uncharacterized protein. | 0.611 |
A0A5S6PTH5 | Bm219 | A0A5S6PTH5 | A0A0J9XNR5 | Uncharacterized protein. | Bm219. | 0.572 |
A0A5S6PTH5 | Bma-ubq-1 | A0A5S6PTH5 | A0A1P6BY67 | Uncharacterized protein. | BMA-UBQ-1, isoform a; BMA-UBQ-1, isoform e. | 0.436 |
Bm1_11535 | Bm1_36210 | A0A0I9N4U8 | A0A0K0IMJ8 | Bm5108; Belongs to the ubiquitin-conjugating enzyme family. | Bm10237. | 0.656 |
Bm1_11535 | Bm1_41885 | A0A0I9N4U8 | A0A0K0JPP4 | Bm5108; Belongs to the ubiquitin-conjugating enzyme family. | Bm6802. | 0.537 |
Bm1_11535 | Bm1_54210 | A0A0I9N4U8 | A0A5S6PA72 | Bm5108; Belongs to the ubiquitin-conjugating enzyme family. | Uncharacterized protein. | 0.945 |
Bm1_11535 | Bm219 | A0A0I9N4U8 | A0A0J9XNR5 | Bm5108; Belongs to the ubiquitin-conjugating enzyme family. | Bm219. | 0.728 |
Bm1_11535 | Bma-ubq-1 | A0A0I9N4U8 | A0A1P6BY67 | Bm5108; Belongs to the ubiquitin-conjugating enzyme family. | BMA-UBQ-1, isoform a; BMA-UBQ-1, isoform e. | 0.962 |
Bm1_11535 | bma-ned-8 | A0A0I9N4U8 | A0A0J9Y5V7 | Bm5108; Belongs to the ubiquitin-conjugating enzyme family. | BMA-NED-8. | 0.645 |
Bm1_11535 | bma-rps-30 | A0A0I9N4U8 | A0A1U7F3P3 | Bm5108; Belongs to the ubiquitin-conjugating enzyme family. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.730 |
Bm1_14295 | Bm1_41885 | A0A0K0JAQ5 | A0A0K0JPP4 | BMA-UBXN-4, isoform a. | Bm6802. | 0.591 |
Bm1_14295 | Bm1_54210 | A0A0K0JAQ5 | A0A5S6PA72 | BMA-UBXN-4, isoform a. | Uncharacterized protein. | 0.653 |
Bm1_14295 | Bm219 | A0A0K0JAQ5 | A0A0J9XNR5 | BMA-UBXN-4, isoform a. | Bm219. | 0.467 |
Bm1_14295 | Bma-ubq-1 | A0A0K0JAQ5 | A0A1P6BY67 | BMA-UBXN-4, isoform a. | BMA-UBQ-1, isoform a; BMA-UBQ-1, isoform e. | 0.802 |
Bm1_14295 | bma-ned-8 | A0A0K0JAQ5 | A0A0J9Y5V7 | BMA-UBXN-4, isoform a. | BMA-NED-8. | 0.581 |
Bm1_14295 | bma-rps-30 | A0A0K0JAQ5 | A0A1U7F3P3 | BMA-UBXN-4, isoform a. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.653 |
Bm1_36210 | Bm1_11535 | A0A0K0IMJ8 | A0A0I9N4U8 | Bm10237. | Bm5108; Belongs to the ubiquitin-conjugating enzyme family. | 0.656 |
Bm1_36210 | Bm1_41885 | A0A0K0IMJ8 | A0A0K0JPP4 | Bm10237. | Bm6802. | 0.537 |
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