Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMBAC01P19.06 | Bm1_09210 | Q8IHI1 | A0A1P6C5F7 | Probable DNA replication complex GINS protein PSF2; The GINS complex plays an essential role in the initiation of DNA replication. | BMA-PSF-1, isoform c. | 0.986 |
BMBAC01P19.06 | Bm1_20555 | Q8IHI1 | A0A5S6PUC4 | Probable DNA replication complex GINS protein PSF2; The GINS complex plays an essential role in the initiation of DNA replication. | DNA replication complex GINS protein SLD5. | 0.978 |
BMBAC01P19.06 | Bm1_48490 | Q8IHI1 | A0A5S6PT53 | Probable DNA replication complex GINS protein PSF2; The GINS complex plays an essential role in the initiation of DNA replication. | DNA helicase. | 0.955 |
BMBAC01P19.06 | Bm3809 | Q8IHI1 | A0A1I9G5U6 | Probable DNA replication complex GINS protein PSF2; The GINS complex plays an essential role in the initiation of DNA replication. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.877 |
BMBAC01P19.06 | bma-mcm-5 | Q8IHI1 | A0A0H5S7R6 | Probable DNA replication complex GINS protein PSF2; The GINS complex plays an essential role in the initiation of DNA replication. | DNA helicase; Belongs to the MCM family. | 0.949 |
BMBAC01P19.06 | bma-mcm-6 | Q8IHI1 | A0A0K0JSP7 | Probable DNA replication complex GINS protein PSF2; The GINS complex plays an essential role in the initiation of DNA replication. | DNA helicase; Belongs to the MCM family. | 0.941 |
BMBAC01P19.06 | bma-mcm-7 | Q8IHI1 | A0A0J9XQV4 | Probable DNA replication complex GINS protein PSF2; The GINS complex plays an essential role in the initiation of DNA replication. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.936 |
BMBAC01P19.06 | bma-psf-3 | Q8IHI1 | A0A0K0JUI5 | Probable DNA replication complex GINS protein PSF2; The GINS complex plays an essential role in the initiation of DNA replication. | BMA-PSF-3, isoform a; BMA-PSF-3, isoform b. | 0.978 |
BMBAC01P19.06 | bma-tipn-1 | Q8IHI1 | A0A0K0JAQ8 | Probable DNA replication complex GINS protein PSF2; The GINS complex plays an essential role in the initiation of DNA replication. | TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. | 0.857 |
Bm1_09210 | BMBAC01P19.06 | A0A1P6C5F7 | Q8IHI1 | BMA-PSF-1, isoform c. | Probable DNA replication complex GINS protein PSF2; The GINS complex plays an essential role in the initiation of DNA replication. | 0.986 |
Bm1_09210 | Bm1_20555 | A0A1P6C5F7 | A0A5S6PUC4 | BMA-PSF-1, isoform c. | DNA replication complex GINS protein SLD5. | 0.999 |
Bm1_09210 | Bm1_48490 | A0A1P6C5F7 | A0A5S6PT53 | BMA-PSF-1, isoform c. | DNA helicase. | 0.994 |
Bm1_09210 | Bm3809 | A0A1P6C5F7 | A0A1I9G5U6 | BMA-PSF-1, isoform c. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.985 |
Bm1_09210 | bma-mcm-5 | A0A1P6C5F7 | A0A0H5S7R6 | BMA-PSF-1, isoform c. | DNA helicase; Belongs to the MCM family. | 0.994 |
Bm1_09210 | bma-mcm-6 | A0A1P6C5F7 | A0A0K0JSP7 | BMA-PSF-1, isoform c. | DNA helicase; Belongs to the MCM family. | 0.993 |
Bm1_09210 | bma-mcm-7 | A0A1P6C5F7 | A0A0J9XQV4 | BMA-PSF-1, isoform c. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.991 |
Bm1_09210 | bma-psf-2 | A0A1P6C5F7 | A0A0K0JBJ0 | BMA-PSF-1, isoform c. | DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. | 0.986 |
Bm1_09210 | bma-psf-3 | A0A1P6C5F7 | A0A0K0JUI5 | BMA-PSF-1, isoform c. | BMA-PSF-3, isoform a; BMA-PSF-3, isoform b. | 0.999 |
Bm1_09210 | bma-tipn-1 | A0A1P6C5F7 | A0A0K0JAQ8 | BMA-PSF-1, isoform c. | TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. | 0.981 |
Bm1_20555 | BMBAC01P19.06 | A0A5S6PUC4 | Q8IHI1 | DNA replication complex GINS protein SLD5. | Probable DNA replication complex GINS protein PSF2; The GINS complex plays an essential role in the initiation of DNA replication. | 0.978 |
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