STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bm1_38125BMA-MATH-33, isoform m; Belongs to the peptidase C19 family. (1172 aa)    
Predicted Functional Partners:
Bm1_54210
Uncharacterized protein.
   
 0.985
bma-uvs-1
Bm7543.
    
 0.969
Bma-ubq-1
BMA-UBQ-1, isoform a; BMA-UBQ-1, isoform e.
   
 0.964
Bm1_44235
Uncharacterized protein.
   
 
 0.964
Bm1_36650
Bm5630.
   
 0.878
bma-hid-1
BMA-HID-1.
    
 
 0.786
bma-ned-8
BMA-NED-8.
   
 0.775
A0A5S6PRA7
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.680
A0A5S6PRE4
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.680
bma-usp-14
Ubiquitin carboxyl-terminal hydrolase.
   
 
0.669
Your Current Organism:
Brugia malayi
NCBI taxonomy Id: 6279
Other names: B. malayi, agent of lymphatic filariasis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.