A0A5S6PA18 protein (Brugia malayi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A5S6PA18

Bm1346. (185 aa)

Predicted Functional Partners:

bma-inft-2

0.654

A0A5S6PMQ0

0.654

Bm9262

0.626

Bm1_26610

0.625

bma-swsn-6

0.613

Bm1_09450

0.560

bma-unc-34

0.540

A0A5S6P7K1

0.540

Bm1_34930

0.536

bma-act-5

0.536

Your Current Organism:

Brugia malayi

NCBI taxonomy Id: 6279
Other names: B. malayi, agent of lymphatic filariasis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A5S6P7K1	A0A5S6PA18	A0A5S6P7K1	A0A5S6PA18	BMA-UNC-34, isoform a; BMA-UNC-34, isoform b.	Bm1346.	0.540
A0A5S6P7K1	Bm1_09450	A0A5S6P7K1	A0A5S6P994	BMA-UNC-34, isoform a; BMA-UNC-34, isoform b.	Bm3318, isoform a.	0.410
A0A5S6PA18	A0A5S6P7K1	A0A5S6PA18	A0A5S6P7K1	Bm1346.	BMA-UNC-34, isoform a; BMA-UNC-34, isoform b.	0.540
A0A5S6PA18	A0A5S6PMQ0	A0A5S6PA18	A0A5S6PMQ0	Bm1346.	Uncharacterized protein.	0.654
A0A5S6PA18	Bm1_09450	A0A5S6PA18	A0A5S6P994	Bm1346.	Bm3318, isoform a.	0.560
A0A5S6PA18	Bm1_26610	A0A5S6PA18	A0A0K0JGI1	Bm1346.	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	0.625
A0A5S6PA18	Bm1_34930	A0A5S6PA18	A0A0H5S4Y1	Bm1346.	Bm9238.	0.536
A0A5S6PA18	Bm9262	A0A5S6PA18	A0A0H5S475	Bm1346.	Bm9262.	0.626
A0A5S6PA18	bma-act-5	A0A5S6PA18	A0A0K0JJB8	Bm1346.	Actin; BMA-ACT-5.	0.536
A0A5S6PA18	bma-inft-2	A0A5S6PA18	A0A0K0JTF0	Bm1346.	BMA-INFT-2, isoform a; BMA-INFT-2, isoform b.	0.654
A0A5S6PA18	bma-swsn-6	A0A5S6PA18	A0A0H5S0H8	Bm1346.	BMA-SWSN-6; Belongs to the actin family.	0.613
A0A5S6PA18	bma-unc-34	A0A5S6PA18	A0A0H5SNL0	Bm1346.	BMA-UNC-34, isoform a; BMA-UNC-34, isoform b.	0.540
A0A5S6PMQ0	A0A5S6PA18	A0A5S6PMQ0	A0A5S6PA18	Uncharacterized protein.	Bm1346.	0.654
A0A5S6PMQ0	Bm1_09450	A0A5S6PMQ0	A0A5S6P994	Uncharacterized protein.	Bm3318, isoform a.	0.760
A0A5S6PMQ0	Bm1_26610	A0A5S6PMQ0	A0A0K0JGI1	Uncharacterized protein.	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	0.590
A0A5S6PMQ0	Bm1_34930	A0A5S6PMQ0	A0A0H5S4Y1	Uncharacterized protein.	Bm9238.	0.584
A0A5S6PMQ0	bma-act-5	A0A5S6PMQ0	A0A0K0JJB8	Uncharacterized protein.	Actin; BMA-ACT-5.	0.584
A0A5S6PMQ0	bma-swsn-6	A0A5S6PMQ0	A0A0H5S0H8	Uncharacterized protein.	BMA-SWSN-6; Belongs to the actin family.	0.461
Bm1_09450	A0A5S6P7K1	A0A5S6P994	A0A5S6P7K1	Bm3318, isoform a.	BMA-UNC-34, isoform a; BMA-UNC-34, isoform b.	0.410
Bm1_09450	A0A5S6PA18	A0A5S6P994	A0A5S6PA18	Bm3318, isoform a.	Bm1346.	0.560