STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bm1_498555'-3' exoribonuclease. (937 aa)    
Predicted Functional Partners:
Bm4341
Bm4341.
   
 
 0.993
Bma-paxt-1
BMA-PAXT-1, isoform b.
    
 
 0.949
Bma-cids-1
BMA-CIDS-1.
   
 
 0.915
A0A5S6PFW1
BMA-CIDS-1.
   
 
 0.915
A0A5S6PSH2
5'-3' exoribonuclease 1.
  
 
 
0.824
Bm3393
Bm3393.
   
 
 0.752
A0A5S6PK91
Bm3393.
   
 
 0.752
bma-mtr-4
Bm13791.
   
 0.751
Bm6948
Bm6948, isoform c.
   
 
 0.710
Bm1_36175
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
  
 0.705
Your Current Organism:
Brugia malayi
NCBI taxonomy Id: 6279
Other names: B. malayi, agent of lymphatic filariasis
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.